Insertion junction: LMJ.RY0402.125535_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.125535
Chromosome:chromosome_17
Location:3900036
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre17.g728300 FAP226,CAL6 Calpain cysteine protease and Flagellar Associated Protein sense intron

Insertion site details

Flanking sequence (orientation from cassette outwards):CTAAACCGGACCGGGGGAAGAGTGGTCGGG
Internal bar code:TGATACCGTTTAATGAAATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:619
LEAP-Seq percent confirming:96.8509
LEAP-Seq n confirming:1630
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCCAGGTAGTACGGTAG
Suggested primer 2:CGTCTTCGTTGGTTTTGGTT