Insertion junction: LMJ.RY0402.125699_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.125699
Chromosome:chromosome 17
Location:3689543
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g726950 (1 of 1) PTHR11042//PTHR11042:SF102 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED // INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED PROTEIN KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAAACGTGCCTCTCCCTCTCCCTGTGC
Internal bar code:TGCATCAAGCTGGTCGGCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:399
LEAP-Seq percent confirming:99.2686
LEAP-Seq n confirming:2036
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACGCAGCAAGAAAG
Suggested primer 2:GACTTTTGCTGCTGGGAGAC