Insertion junction: LMJ.RY0402.125781_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.125781
Chromosome:chromosome 3
Location:5378723
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGGGCGAGGCGGACAGTTCGGGGTTGG
Internal bar code:TTAGATAGACAAAGTTTTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:815
LEAP-Seq percent confirming:99.848
LEAP-Seq n confirming:1314
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGTACCAGTTCCTGTGC
Suggested primer 2:AGCTCGCTGTCCTTGAATGT