Insertion junction: LMJ.RY0402.126455_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.126455
Chromosome:chromosome 11
Location:1559501
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467756 MMP5 Metalloproteinase of VMP family; (1 of 51) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCATAAGGGGCCCCACGGTACGCGCCTG
Internal bar code:TGTCCGTGCACCGGGTTTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:327
LEAP-Seq percent confirming:97.6446
LEAP-Seq n confirming:6177
LEAP-Seq n nonconfirming:149
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCTATCCCATTTCCCTT
Suggested primer 2:TCATAGCGCAAAGGGAGAGT