Insertion junction: LMJ.RY0402.126734_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.126734
Chromosome:chromosome 9
Location:3651784
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGTTCGCGCTCGAGACCGCCCTGGAGTT
Internal bar code:ATTAATGAGGAAACGGGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:882
LEAP-Seq percent confirming:99.6727
LEAP-Seq n confirming:23450
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:134

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTCCATCCCAGTGAGTGC
Suggested primer 2:TGTGTAACGTGGTCAAGGGA