Insertion junction: LMJ.RY0402.126797_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.126797
Chromosome:chromosome 4
Location:1817596
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g211850 ELI5,ELIP5 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTCTCTCGCGCTAGCTAGCTCCCAGG
Internal bar code:GCCTGTGAAGCTGTCACGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:811
LEAP-Seq percent confirming:99.7941
LEAP-Seq n confirming:5331
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACGGGTGTCAGTGCTTT
Suggested primer 2:CAAGGGAAGCGAGTATCAGC