Insertion junction: LMJ.RY0402.127039_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.127039
Chromosome:chromosome 3
Location:3562779
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g168100 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAATGCTGCAGCGGCAAGCCCAGGGTTTG
Internal bar code:TGGGTGAGCCAGAGGGTGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:789
LEAP-Seq percent confirming:99.7035
LEAP-Seq n confirming:2354
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCGTGTGTAGGGAGGAG
Suggested primer 2:GAGCAAGCTCTTCGAGCCTA