Insertion junction: LMJ.RY0402.127449_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.127449
Chromosome:chromosome 9
Location:5640160
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g401145 (1 of 2) 3.1.4.12 - Sphingomyelin phosphodiesterase / Neutral sphingomyelinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTTCGTCTGCAGTCTTCAGTGCATCGT
Internal bar code:GGAGTCCGTCCGGGTCTTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:98.7001
LEAP-Seq n confirming:1063
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGGGGGTTTCAGGGTAA
Suggested primer 2:ACCACCCGATTTACTTGCAG