Insertion junction: LMJ.RY0402.127862_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.127862
Chromosome:chromosome 3
Location:8203271
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g200000 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED 3'UTR|3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAACGCGGTCCAGTGGGCAGATGGACGC
Internal bar code:TGAGGATGTATCCGCGCGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:98.0957
LEAP-Seq n confirming:2112
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTACACCGCTTCCTGTC
Suggested primer 2:CTAATACAGAAGCGGAGGCG