Insertion junction: LMJ.RY0402.127862_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.127862
Chromosome:chromosome 3
Location:8203275
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g200000 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED 3'UTR|3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAAACAGAATTAATCTACCCCGTACGT
Internal bar code:TGAGGTCCTGCCGGTTTCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:98.9233
LEAP-Seq n confirming:735
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTACACCGCTTCCTGTC
Suggested primer 2:CTAATACAGAAGCGGAGGCG