Insertion junction: LMJ.RY0402.127901_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.127901
Chromosome:chromosome 5
Location:2787469
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g237150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCAGCGTTGCAGGCGCGTGTTGCAGGT
Internal bar code:AAAACCGAAGGCGCCAGGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:99.8499
LEAP-Seq n confirming:665
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AATTGTCAAGGGTGCAGGTC
Suggested primer 2:GCAACGATATTGACGTGTGG