Insertion junction: LMJ.RY0402.128151_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.128151
Chromosome:chromosome 15
Location:782230
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre15.g640101 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCGCCCGCATTGCTAACCGCGGGGTCG
Internal bar code:TCGCCGTTGCGTTGGGCTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:350
LEAP-Seq percent confirming:79.6426
LEAP-Seq n confirming:1248
LEAP-Seq n nonconfirming:319
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTTTGACAATCGCATA
Suggested primer 2:CGTGTGCTAAAGCCAACAAA