Insertion junction: LMJ.RY0402.128236_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.128236
Chromosome:chromosome 8
Location:1429460
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g364400 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGATACAAGCTCTCCATTTTGTCCTGAG
Internal bar code:AGAGAATGGTATGCGGGGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:99.7651
LEAP-Seq n confirming:2548
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGTCCCCATCGCCTGTA
Suggested primer 2:GAGAGAGGACACCGAACTGC