Insertion junction: LMJ.RY0402.128280_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.128280
Chromosome:chromosome 17
Location:3291126
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g723100 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCTGTACCTGCGTCCACACTCTCCCTT
Internal bar code:CCGCATTCGGTGCTGTTTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:312
LEAP-Seq percent confirming:99.5577
LEAP-Seq n confirming:5402
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAAGTGGAAGAGTGACAA
Suggested primer 2:GCATTCATGAAGGGTCCTGT