Insertion junction: LMJ.RY0402.128366_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.128366
Chromosome:chromosome 3
Location:5374184
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGATTGGCCACAGTAGGATTGGACCCGG
Internal bar code:CTACGGAACCCCCAGACAATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:570
LEAP-Seq percent confirming:98.5849
LEAP-Seq n confirming:209
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGTCTGAAGCGTGTGA
Suggested primer 2:CATAAGGACGTGGCGTAGGT