Insertion junction: LMJ.RY0402.128392_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.128392
Chromosome:chromosome 3
Location:3351855
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g166600 DIV147 (1 of 1) PTHR13366//PTHR13366:SF0 - MALARIA ANTIGEN-RELATED // HEAT REPEAT-CONTAINING PROTEIN 6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGACCCAAACTCCCAGTGCCCCTGCCCCT
Internal bar code:ACATTCATCAGGTGTCCAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:99.8937
LEAP-Seq n confirming:3758
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTAGCAAGAAGGGACAAG
Suggested primer 2:GACAAGGCTGACCTTCTTGC