Insertion junction: LMJ.RY0402.128573_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.128573
Chromosome:chromosome 16
Location:6218810
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g675100 CPLD53 Conserved in the Plant Lineage and Diatoms; (1 of 3) PTHR31319:SF10 - ZINC FINGER PROTEIN CONSTANS-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCACACACGGTTGAAGAATGTTCGGAT
Internal bar code:AGGGTATGGAAGGAGGACAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:698
LEAP-Seq percent confirming:88.7611
LEAP-Seq n confirming:1003
LEAP-Seq n nonconfirming:127
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACCTCAGGATCTCGTGC
Suggested primer 2:TATGTTACCGTTGTCCGCAA