Insertion junction: LMJ.RY0402.128643_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.128643
Chromosome:chromosome 2
Location:405239
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g076050 (1 of 2) IPR000008//IPR000104 - C2 domain // Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTCAGTTGCCCCTGTGAATGCCGGTAA
Internal bar code:GGCCCGATGAGTCGCTCGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:94.7131
LEAP-Seq n confirming:28287
LEAP-Seq n nonconfirming:1579
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTAACTGCCCAGACCAG
Suggested primer 2:CACACACGTTTTCCTTGTGC