Insertion junction: LMJ.RY0402.129064_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.129064
Chromosome:chromosome 3
Location:9011939
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g209953 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCGCCGGCAGCCTGGCGGCGGCGGGCT
Internal bar code:GGGAAGTCATCGGACTTCTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:21.7391
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGCCAACACGACAGTAT
Suggested primer 2:CAATGACGTTGTTCAGGTCG