Insertion junction: LMJ.RY0402.129378_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.129378
Chromosome:chromosome 6
Location:3766490
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCAATAATGGGCTCAAGCCCACGGTAA
Internal bar code:GGCTATGGTTCTAACTAAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:27
LEAP-Seq percent confirming:87.6487
LEAP-Seq n confirming:958
LEAP-Seq n nonconfirming:135
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACCTCCGAGTACCTGTC
Suggested primer 2:CTCCTCCTCCACCTCCTTTC