Insertion junction: LMJ.RY0402.129399_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.129399
Chromosome:chromosome 1
Location:937776
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g005150 SGA1 Serine glyoxylate aminotransferase; (1 of 1) 2.6.1.44//2.6.1.45//2.6.1.51 - Alanine--glyoxylate transaminase / Alanine--glyoxylate aminotransferase // Serine--glyoxylate transaminase / SGAT // Serine--pyruvate transaminase / Serine--pyruvate aminotransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCTCAATCCTTTAACGAACAAACACGA
Internal bar code:CGCGTGCTACTAGGTTCGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:731
LEAP-Seq percent confirming:99.8745
LEAP-Seq n confirming:1591
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGGCTCCGTGGCTTAGT
Suggested primer 2:ACATGAACGAGCTGATGCTG