Insertion junction: LMJ.RY0402.129432_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.129432
Chromosome:chromosome 16
Location:291836
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g694201 (1 of 1) PTHR12461//PTHR12461:SF46 - HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED // SUBFAMILY NOT NAMED; Cupin- Jumonji-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTAGTTGAACAGGATGGCGGTTGCGCCT
Internal bar code:GGGGTGCGGATAACGCGTCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:253
LEAP-Seq percent confirming:99.8968
LEAP-Seq n confirming:4841
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCGATGGAGAGAATGGA
Suggested primer 2:CTGGACGTGTCCAACATCAC