Insertion junction: LMJ.RY0402.129446_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.129446
Chromosome:chromosome 13
Location:3448781
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g587500 AOF8 (1 of 2) 1.3.5.5 - 15-cis-phytoene desaturase / Plant-type phytoene desaturase; Flavin-containing amine oxidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAAGAGGGGGCGTGTCATCCCTCTGGCC
Internal bar code:TTTTTAGTTTACTGTAATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:446
LEAP-Seq percent confirming:99.5028
LEAP-Seq n confirming:5003
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCAAGTGCCAGTGCATC
Suggested primer 2:CCTAAGTCTCCAAACGCAGC