Insertion junction: LMJ.RY0402.129449_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.129449
Chromosome:chromosome 13
Location:3504739
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g587800 NUP188 (1 of 1) PTHR31431:SF1 - NUCLEOPORIN NUP188 HOMOLOG; Nucleoporin 188 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTCGGTTTGCACAAGGCTCGCGCGTAT
Internal bar code:CGGCGATCTTGTGCGGCACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:89.5153
LEAP-Seq n confirming:8256
LEAP-Seq n nonconfirming:967
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CTATCTCGTGTGGGGCAGAT
Suggested primer 2:CCAGCAGTGTGTGAGTGGTT