Insertion junction: LMJ.RY0402.129461_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.129461
Chromosome:chromosome 12
Location:3780884
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g515250 ROC7 Rythm Of Chloroplast bioluminescence 7; (1 of 1) PF09758 - Uncharacterised conserved protein (FPL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGACGGTCCGGGGCGAGTTGCGTGATGG
Internal bar code:GGGACAGCGCCGCTGTTCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:404
LEAP-Seq percent confirming:99.0552
LEAP-Seq n confirming:7129
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTGTAGACACCCTGAGA
Suggested primer 2:GAGAGTTTGAGGCATCTCGC