Insertion junction: LMJ.RY0402.129762_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.129762
Chromosome:chromosome 17
Location:2691873
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCATGTGGAGTTAAGTGATGCGGCTA
Internal bar code:AGCTCCTACCTGTTCTGCTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:99.7647
LEAP-Seq n confirming:1696
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCTGGCCATTAGGTATT
Suggested primer 2:CAGCTCGGCTACATGAACAA