Insertion junction: LMJ.RY0402.129789_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.129789
Chromosome:chromosome 4
Location:2026127
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g218900 (1 of 2) PTHR10887//PTHR10887:SF333//PTHR13779//PTHR13779:SF20 - DNA2/NAM7 HELICASE FAMILY // SUBFAMILY NOT NAMED // HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCTCATTGCCTGCGCCCCCCGCAAGT
Internal bar code:GTATCAATTCTCTTGTTTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:310
LEAP-Seq percent confirming:99.5696
LEAP-Seq n confirming:3470
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTATGACCTGTCGTCCAT
Suggested primer 2:CGCCCAGAGACACTAGGAAG