Insertion junction: LMJ.RY0402.129793_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.129793
Chromosome:chromosome 4
Location:3130541
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g225850 VAMP73,VAM3,VAMP3 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 3) PTHR21136//PTHR21136:SF4 - SNARE PROTEINS // N-SYNAPTOBREVIN, ISOFORM J 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGGCAAATTTTGGGGGGCAACTGGCC
Internal bar code:AAGTAAGAAGGCGGCAGGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:890
LEAP-Seq percent confirming:99.74
LEAP-Seq n confirming:3452
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCCCGTTTAGAGTACCA
Suggested primer 2:CCGCGTACTTCTCCTCAAAC