Insertion junction: LMJ.RY0402.129802_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.129802
Chromosome:chromosome 9
Location:7175158
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g412150 PPR11 (1 of 12) IPR002885 - Pentatricopeptide repeat; PentatricoPeptide Repeat protein 11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCCCCTCCTCATTCTCCCACAGGCCGC
Internal bar code:GGGCGTCGTGAGGGCCAGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:88.6792
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTCCCAACCAGACCAAGG
Suggested primer 2:TCGTACGCCTGCAGTTATTG