Insertion junction: LMJ.RY0402.130220_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.130220
Chromosome:chromosome 3
Location:7297631
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g206950 (1 of 1) PF05183 - RNA dependent RNA polymerase (RdRP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGCGGGCCCGTGGTGGCGGGTGGCGG
Internal bar code:TCAACTAGGGGCTCAATGACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:373
LEAP-Seq percent confirming:45.3155
LEAP-Seq n confirming:12648
LEAP-Seq n nonconfirming:15263
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGTGGCATGGTAGTTCGG
Suggested primer 2:CACAAACACGCACAAACACA