Insertion junction: LMJ.RY0402.130290_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.130290
Chromosome:chromosome 12
Location:3334497
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g497652 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATCGCTCCAGCGACCTCCCTCTCCAAT
Internal bar code:GTAGCGACGTCGTATCATTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:785
LEAP-Seq percent confirming:97.4684
LEAP-Seq n confirming:154
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTCCACTCTTGCCTAC
Suggested primer 2:CCCTCTGTAACATCCGCATT