Insertion junction: LMJ.RY0402.130702_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.130702
Chromosome:chromosome 9
Location:3651567
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTGGGTCGGTCCAGACATCGGGGGAGA
Internal bar code:CCGACTTGCAAGTTTTGCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:667
LEAP-Seq percent confirming:99.5761
LEAP-Seq n confirming:6342
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGTCTGGGCCTAAACTT
Suggested primer 2:ATTTCCATCCCAGTGAGTGC