Insertion junction: LMJ.RY0402.130704_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.130704
Chromosome:chromosome 6
Location:4003660
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278199 (1 of 4) 1.13.11.75 - All-trans-8'-apo-beta-carotenal 15,15'-oxygenase / 8'-apo-beta-carotenal 15,15'-oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGACCTGCCCTCACCAAACTCCCTTGT
Internal bar code:GCGATTTTACGTCTATGTACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:27
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCTGTGTAATTGTGATG
Suggested primer 2:GCGACCTGTAGAGTGCATGA