Insertion junction: LMJ.RY0402.131125_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.131125
Chromosome:chromosome 3
Location:8843157
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g206817 (1 of 2) IPR001739//IPR016177 - Methyl-CpG DNA binding // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCCACGCACCCGGTCCTGTCGCCTACA
Internal bar code:CTTGCCATCGAACAGGCCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:448
LEAP-Seq percent confirming:99.0091
LEAP-Seq n confirming:11291
LEAP-Seq n nonconfirming:113
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAACAGACGCTCCTGAC
Suggested primer 2:CACCTGCCTCAACTGTCGTA