Insertion junction: LMJ.RY0402.131127_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.131127
Chromosome:chromosome 3
Location:996560
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g148201 (1 of 10) IPR013781 - Glycoside hydrolase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGCCACCAGGGAAGGAAGGAGCAGAAG
Internal bar code:ACCTGGGGTCGCCCGTGCCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:884
LEAP-Seq percent confirming:74.8868
LEAP-Seq n confirming:11412
LEAP-Seq n nonconfirming:3827
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCTGGCATTCAGATAC
Suggested primer 2:GGAGTAGTTGCTGCTCCTGG