Insertion junction: LMJ.RY0402.131138_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.131138
Chromosome:chromosome 12
Location:49434
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g483650 STL1 (1 of 3) PTHR11584:SF316 - SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC; Ser-Thr protein kinase, paralog of STT7 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTATGGCCAGCCCACCGCTCGGAATGT
Internal bar code:CCGCCACATGAAAGTCAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:982
LEAP-Seq percent confirming:83.2627
LEAP-Seq n confirming:3338
LEAP-Seq n nonconfirming:671
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTAGATACCAGCCCCAGG
Suggested primer 2:GTCCTCATCTCCCTGCACAT