Insertion junction: LMJ.RY0402.131155_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.131155
Chromosome:chromosome 10
Location:3257874
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g443100 (1 of 1) IPR001214//IPR023220 - SET domain // Type IV secretion system, VirB5-domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACCAACAAGGCACTAAGCAATTACGGT
Internal bar code:GGGCTCTTCTCTTAACGAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:933
LEAP-Seq percent confirming:99.5996
LEAP-Seq n confirming:9951
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCCAAACTAAACCAAA
Suggested primer 2:GCGTGTGCTTCTGATCATGT