Insertion junction: LMJ.RY0402.131349_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.131349
Chromosome:chromosome 10
Location:6433818
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g465950 CGL148 Conserved in the Green Lineage; (1 of 1) K12846 - U4/U6.U5 tri-snRNP-associated protein 3 (SNRNP27) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGAAGTCGCTGTGCGGGGTGGACGCT
Internal bar code:GTTAGTCTGTCGTCCTTTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:93
LEAP-Seq percent confirming:7.14137
LEAP-Seq n confirming:344
LEAP-Seq n nonconfirming:4473
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTACCACGAGAGGGACA
Suggested primer 2:TAAACACGCGTTATGGGTGA