Insertion junction: LMJ.RY0402.131377_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.131377
Chromosome:chromosome 3
Location:1287861
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g150251 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGACGCAACATCAGGTGCGTCAGGGGGG
Internal bar code:CACAATTAATGGCGGGTCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:70
LEAP-Seq percent confirming:41.5902
LEAP-Seq n confirming:136
LEAP-Seq n nonconfirming:191
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGGTGGCAAGAAAGGTG
Suggested primer 2:TAGCAGGATCAGGGAAGCTG