Insertion junction: LMJ.RY0402.131706_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.131706
Chromosome:chromosome 13
Location:1418528
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g572050 SMG1 (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1); Nonsense-mediated decay (NMD) pathway protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGTTGGTTGTGTGTGTGGCGCTGATT
Internal bar code:GAAACGGGCATCTGGCGACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:161
LEAP-Seq percent confirming:99.7643
LEAP-Seq n confirming:1693
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGACTTAATCTCACCGCC
Suggested primer 2:TGGCCTTACTCAAATCCAGG