Insertion junction: LMJ.RY0402.131717_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.131717
Chromosome:chromosome 1
Location:324803
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGTGGGAGTACCAGGGGGGGGGGAGGT
Internal bar code:TTCGGCCTCTAGCCCGGTACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:591
LEAP-Seq percent confirming:93.007
LEAP-Seq n confirming:665
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TAATACGGCTTGGACGAACC
Suggested primer 2:AGTGGTGTGGGAGAGGTTTG