Insertion junction: LMJ.RY0402.131949_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.131949
Chromosome:chromosome 9
Location:1831278
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g395950 AOX1 Alternative oxidase, mitochondrial; (1 of 2) PTHR31803//PTHR31803:SF3 - FAMILY NOT NAMED // ALTERNATIVE OXIDASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGTAACGCATGCTGATGCCCCATGTA
Internal bar code:GTTTGACTGATCGGCGGCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:960
LEAP-Seq percent confirming:99.4487
LEAP-Seq n confirming:9380
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTTCCCTCACCACACAA
Suggested primer 2:AGGGCAGAAGGCACTCAGTA