Insertion junction: LMJ.RY0402.131969_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.131969
Chromosome:chromosome 6
Location:1200028
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g257600 FA1 (1 of 4) PF13516 - Leucine Rich repeat (LRR_6); Flagellar Autonomy Protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATTGCGCCACCGCCGGCAGCAGATCAT
Internal bar code:TCAGAGGCCGGATGTTAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:618
LEAP-Seq percent confirming:92.0794
LEAP-Seq n confirming:8533
LEAP-Seq n nonconfirming:734
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGCATTGACCATCAGTC
Suggested primer 2:TACATTGACCCGCTCACATC