Insertion junction: LMJ.RY0402.132007_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.132007
Chromosome:chromosome 14
Location:3655579
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g631400 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACGGAACAAACGTCCAACGTCAGGGCGT
Internal bar code:CCTGTGGGGGACCGCCAAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:99.6663
LEAP-Seq n confirming:6571
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTGCTGGGAAGAGTCGC
Suggested primer 2:GGTGTTAGCAAGTCACCCGT