Insertion junction: LMJ.RY0402.132032_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.132032
Chromosome:chromosome 12
Location:5896436
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g534000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTAAGGGCGGGTTGGGGTGTTTGTGCAT
Internal bar code:CTTATGTCGATGGCGTGCGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1004
LEAP-Seq percent confirming:99.8223
LEAP-Seq n confirming:15728
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAATGAACTGGTTCGCCT
Suggested primer 2:ACGCTGCAGTGTTGGTAGTG