Insertion junction: LMJ.RY0402.132278_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.132278
Chromosome:chromosome 13
Location:2530340
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g580550 HLM20 (1 of 2) K11426 - SET and MYND domain-containing protein (SMYD); putative N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTATGCAGCGTGGCGGGTGACAGGGAG
Internal bar code:GCATAACACACTCTTGGCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:249
LEAP-Seq percent confirming:98.7188
LEAP-Seq n confirming:1541
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGTTTTGCCTCGTAGC
Suggested primer 2:CACGTAGTTGACGGTGTTGG