Insertion junction: LMJ.RY0402.132296_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.132296
Chromosome:chromosome 11
Location:3441100
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g481050 (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCAACCCATCCTCAACATCATTATCGC
Internal bar code:AGCAGCAAGGGGTAGCACGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:640
LEAP-Seq percent confirming:98.3755
LEAP-Seq n confirming:5450
LEAP-Seq n nonconfirming:90
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTGATAACGGCCACAC
Suggested primer 2:CAGCGGGAAGAGGAGTACAG