Insertion junction: LMJ.RY0402.132333_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.132333
Chromosome:chromosome 10
Location:3362870
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g444000 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCAATGAGCGTGTTCGGAAGCGGCTGC
Internal bar code:TGCGCGGACGGGGGGCCTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:712
LEAP-Seq percent confirming:99.961
LEAP-Seq n confirming:2560
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGTGCATCGGAGACTA
Suggested primer 2:CACCCCGTTAGTGAATTGCT