Insertion junction: LMJ.RY0402.132337_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.132337
Chromosome:chromosome 16
Location:5500831
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g680700 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATGTGGAGTCCTGTTTACCGTGTGGC
Internal bar code:TGTGGCTGGGGTGTCTATCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:341
LEAP-Seq percent confirming:78.5477
LEAP-Seq n confirming:2834
LEAP-Seq n nonconfirming:774
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTTGGAGGAGCAAAAA
Suggested primer 2:GAAGGTGAGGCTGAAAGTCG