Insertion junction: LMJ.RY0402.132424_5

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.132424
Chromosome:chromosome 11
Location:1554415
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g467756 MMP5 Metalloproteinase of VMP family; (1 of 51) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTTCCCTTCCCTGCCTCCTCTCTCTCC
Internal bar code:CCGATCACGAGCCAGGGCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:98.892
LEAP-Seq n confirming:357
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AACACCTACTCCATCGGTGC
Suggested primer 2:CCCTACCCGTGTCTGAGGTA